| College Name | Approved | Location | MHRD Out Of 100 Ranking |
| KIT’s College of Engineering, Kolhapur | AICTE | Kolhapur, Maharashtra | – |
| DY Patil University, Navi Mumbai | NAAC-A | Navi Mumbai, Maharashtra | – |
| Maharashtra Academy of Naval Education and Training – [MANET] | AICTE | Pune, Maharashtra | – |
| Vasantrao Naik Marathwada Krishi Vidyapeeth – [VNMKV] | ICAR | Parbhani, Maharashtra | – |
| MIT College of Food Technology – [MITCFT] | AICTE | Pune, Maharashtra | – |
| Dr DY Patil Vidyapeeth – [DPU], Pune | NAAC, UGC, MHRD, AIU | Pune, Maharashtra | – |
| Dr. Panjabrao Deshmukh Krishi Vidyapeeth – [PDKV] | AICTE, ICAR, UGC | Akola, Maharashtra | – |
| MGM College of Agricultural Biotechnology | DCI | Aurangabad, Maharashtra | – |
| Dr DY Patil School of Biotechnology and Bioinformatics | NAAC-A | Navi Mumbai, Maharashtra | – |
| Dr DY Patil Biotechnology and Bioinformatics Institute Tathawade | NAAC-A | Pune, Maharashtra | – |
| Amity University, Mumbai | UGC | Mumbai, Maharashtra | — |
| Ajeenkya DY Patil University – [ADYPU] | AICTE, UGC | Pune, Maharashtra | – |
| Sandip University, Nashik | NCTE, BCI, AICTE, UGC | Nashik, Maharashtra | – |
| Chhatrapati Shivaji Maharaj University – [CSMU], Navi Mumbai | UGC | Navi Mumbai, Maharashtra | – |